Package: RobustPrediction 0.1.6

RobustPrediction: Robust Tuning and Training for Cross-Source Prediction

Provides robust parameter tuning and model training for predictive models applied across data sources where the data distribution varies slightly from source to source. This package implements three primary tuning methods: cross-validation-based internal tuning, external tuning, and the 'RobustTuneC' method. External tuning includes a conservative option where parameters are tuned internally on the training data and validating on an external dataset, providing a slightly pessimistic AUC estimate. It supports Lasso, Ridge, Random Forest, Boosting, and Support Vector Machine classifiers. Currently, only binary classification is supported. The response variable must be the first column of the dataset and a factor with exactly two levels. The tuning methods are based on the paper by Nicole Ellenbach, Anne-Laure Boulesteix, Bernd Bischl, Kristian Unger, and Roman Hornung (2021) "Improved Outcome Prediction Across Data Sources Through Robust Parameter Tuning" <doi:10.1007/s00357-020-09368-z>.

Authors:Yuting He [aut, cre], Nicole Ellenbach [ctb], Roman Hornung [ctb]

RobustPrediction_0.1.6.tar.gz
RobustPrediction_0.1.6.zip(r-4.7)RobustPrediction_0.1.6.zip(r-4.6)RobustPrediction_0.1.6.zip(r-4.5)
RobustPrediction_0.1.6.tgz(r-4.6-any)RobustPrediction_0.1.6.tgz(r-4.5-any)
RobustPrediction_0.1.6.tar.gz(r-4.7-any)RobustPrediction_0.1.6.tar.gz(r-4.6-any)
RobustPrediction_0.1.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION
card.svg |card.png
RobustPrediction/json (API)

# Install 'RobustPrediction' in R:
install.packages('RobustPrediction', repos = c('https://yuting-he.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/yuting-he/robustprediction/issues

Datasets:

On CRAN:

Conda:

2.00 score 172 downloads 19 exports 53 dependencies

Last updated from:8194501840. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK153
source / vignettesOK190
linux-release-x86_64OK160
macos-release-arm64OK135
macos-oldrel-arm64OK164
windows-develOK115
windows-releaseOK110
windows-oldrelOK113
wasm-releaseOK139

Exports:tuneandtraintuneandtrainExttuneandtrainExtBoosttuneandtrainExtLassotuneandtrainExtRFtuneandtrainExtRidgetuneandtrainExtSVMtuneandtrainInttuneandtrainIntBoosttuneandtrainIntLassotuneandtrainIntRFtuneandtrainIntRidgetuneandtrainIntSVMtuneandtrainRobustTuneCtuneandtrainRobustTuneCBoosttuneandtrainRobustTuneCLassotuneandtrainRobustTuneCRFtuneandtrainRobustTuneCRidgetuneandtrainRobustTuneCSVM

Dependencies:backportsBBmisccheckmateclassclicodetoolscpp11data.tablee1071farverfastmatchforeachFormulaggplot2glmnetgluegtableinumisobanditeratorslabelinglatticelibcoinlifecycleMASSMatrixmboostmlrmvtnormnnlsparallelMapParamHelperspartykitpROCproxyquadprogR6rangerRColorBrewerRcppRcppEigenrlangrpartS7scalesshapestabsstringisurvivalvctrsviridisLitewithrXML